Bioconductor Differential binding analysis

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5.8k

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DiffBind differential binding analysis

updated 8.7 years ago by Rory Stark ★ 5.2k • written 8.7 years ago by February • 0

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4.6k

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ATAC differential binding analysis no replicates DEseq2 chromatin

7.2 years ago • updated 7.1 years ago BioinfGuru ▴ 30

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4.5k

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diffbind bioconductor differential binding analysis without replicate chipseq

6.5 years ago Hesh ▴ 10

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3.6k

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diffbind differential binding analysis

updated 7.3 years ago by Rory Stark ★ 5.2k • written 7.3 years ago by rbronste ▴ 60

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3.4k

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deseq2 deseq differential binding analysis

updated 6.3 years ago by Michael Love 42k • written 6.3 years ago by rbronste ▴ 60

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2.8k

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csaw chipseq differential binding analysis

updated 8.0 years ago by Aaron Lun ★ 28k • written 8.0 years ago by markus.ringner ▴ 10

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2.6k

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chipseq deseq2 featurecounts differential binding analysis

updated 6.0 years ago by Michael Love 42k • written 6.0 years ago by hkarakurt ▴ 20

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2.1k

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diffbind p-value differential binding analysis fold enrichment values using diffbind

updated 7.9 years ago by Rory Stark ★ 5.2k • written 7.9 years ago by alisonhanh.nguyen • 0

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1.9k

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edger csaw chipseq differential binding analysis

updated 7.3 years ago by Aaron Lun ★ 28k • written 7.3 years ago by dalerr • 0

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1.9k

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deseq2 model matrix not full rank model.matrix deseq differential binding analysis

updated 6.3 years ago by Simon Anders ★ 3.7k • written 6.3 years ago by rbronste ▴ 60

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1.8k

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diffbind differential binding analysis multiple factor design

written 6.6 years ago by jared.andrews07 ▴ 30

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1.8k

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deseq2 deseq differential binding analysis

updated 6.4 years ago by Michael Love 42k • written 6.4 years ago by rbronste ▴ 60

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1.6k

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csaw differential binding analysis chipseq differential expression differential gene expression

updated 8.1 years ago by Aaron Lun ★ 28k • written 8.1 years ago by Amitha Sampath ▴ 10

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1.6k

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csaw differential binding analysis sample size independent filtering statistical power

updated 6.7 years ago by Aaron Lun ★ 28k • written 6.7 years ago by zhangly811 • 0

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1.5k

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deseq2 differential binding analysis deseq atac-seq

updated 6.3 years ago by Michael Love 42k • written 6.3 years ago by rbronste ▴ 60

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1.5k

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diffbind differential binding analysis

updated 3.5 years ago by Rory Stark ★ 5.2k • written 5.8 years ago by Thomas ▴ 10

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1.4k

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csaw differential binding analysis

8.6 years ago Pierre-François Roux • 0

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1.4k

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diffbind differential binding analysis R report

updated 6.3 years ago by Rory Stark ★ 5.2k • written 6.3 years ago by hlsz.laszlo • 0

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1.4k

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deseq2 differential binding analysis deseq

updated 6.5 years ago by Michael Love 42k • written 6.5 years ago by rbronste ▴ 60

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1.4k

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deseq2 differential binding analysis

updated 6.5 years ago by Michael Love 42k • written 6.5 years ago by rbronste ▴ 60

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1.4k

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diffbind chipseq histone chip-seq differential binding analysis

updated 5.5 years ago by Rory Stark ★ 5.2k • written 5.6 years ago by woongjaej • 0

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1.3k

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chip-seq differential binding analysis

updated 7.8 years ago by Aaron Lun ★ 28k • written 7.8 years ago by damian.kao • 0

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1.3k

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deseq2 deseq diffbind differential binding analysis

updated 6.4 years ago by Michael Love 42k • written 6.4 years ago by rbronste ▴ 60

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1.3k

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csaw differential binding analysis bin size

updated 8.1 years ago by Aaron Lun ★ 28k • written 8.1 years ago by Ryan C. Thompson ★ 7.9k

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1.2k

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deseq2 atac-seq chipseq differential binding analysis

updated 6.4 years ago by Aaron Lun ★ 28k • written 6.4 years ago by rbronste ▴ 60

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1.1k

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diffbind Deseq2 edger differential binding analysis

updated 6.4 years ago by Rory Stark ★ 5.2k • written 6.4 years ago by ew152 • 0

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1.1k

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deseq2 deseq differential binding analysis

updated 6.5 years ago by Andy91 ▴ 60 • written 6.5 years ago by rbronste ▴ 60

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1.0k

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deseq2 deseq differential binding analysis

updated 5.6 years ago by Michael Love 42k • written 5.6 years ago by rbronste ▴ 60

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828

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diffbind chipseq differential binding analysis

updated 6.5 years ago by Rory Stark ★ 5.2k • written 6.5 years ago by rbronste ▴ 60

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815

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diffbind differential binding analysis blocking

updated 6.3 years ago by Rory Stark ★ 5.2k • written 6.4 years ago by zhangly811 • 0

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792

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deseq2 differential binding analysis

updated 6.5 years ago by James W. MacDonald 65k • written 6.5 years ago by rbronste ▴ 60

31 results • Page 1 of 1

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Comment: More regions in union when increasing DBA$config$mergeOverlap by Ziliang • 0

I am so confused and frustrated learning to use this software. Isn't how you merge the peaksets one of the most important steps for the com…

Answer: SingleR Label.Ont by Denis • 0

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Comment: deseq2 results by sajadahmad41454 • 0

thank you so much and sorry for bothering you again and again, it is urgent because it is my project deadline. i have removed that sample a…

Comment: deseq2 results by swbarnes2 ★ 1.4k

Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …